In Bioinformatics, a DNA sequence is made up of a
combination of 4 characters, namely “A,C,G,T”. A
subsequence of a given sequence of characters a0, a1, …an-
1, is any subset of the characters taken in order, of the
form ai0 , ai1 ,…..aik-1 where 0 ≤ i0 <i1….< ik-1 ≤ n-1.
For example in the sequence “A,C,G,T,G,T,C,A,A,A,A,T,C,G”,
we can have subsequences “A,G,T”, “A,C,A,A” and many more.
A subsequence is palindromic if it is the same whether read
left to right or right to left. For instance, the
sequence “A,C,G,T,G,T,C,A,A,A,A,T,C,G”, has many
palindromic subsequences, including “A,C,G,C,A”
and “A,A,A,A” (on the other hand, the subsequence “A,C,T”
is not palindromic). Devise an algorithm (using dynamic
programming) that takes a sequence of characters X[0 … n-1]
from the alphabet set (A,C,G,T) and returns the (length of
the) longest palindromic subsequence. Implement the
algorithm in an appropriate language.
- 1 Answers
- 4854 Views
- I also Faced
- E-Mail Answers
Answer / pragnesh
import java.io.*;
import java.util.*;
public class p3{
public static void main(String[] args) throws
FileNotFoundException{
Scanner inFile = new Scanner(new FileReader("words.txt"));
String s;
String temp, tempRev="";
while(inFile.hasNext()){
s=inFile.nextLine();
temp=s;
temp = temp.replace("?","");
temp = temp.replace(".","");
temp = temp.replace(",","");
temp = temp.replace(":","");
temp = temp.replace("\"","");
temp = temp.replace(" ","");
for(int x=temp.length()-1;x>=0;x--)
tempRev = tempRev + temp.charAt(x);
if(temp.equalsIgnoreCase(tempRev))
System.out.println(s + " is a palindrome");
else
System.out.println(s + " is not a palindrome");
tempRev="";
}
inFile.close();
}
}
maybe you could adapt that to c++
| Is This Answer Correct ? | 0 Yes | 2 No |
Wrtite a JCL for sorting a file with start from 36 postion lenth 9 excluding a num eq to 98768. for 3 marks mainframe
how we can call xml file in java file using Android platform?
what is difference between c and C#
I want to insert date in the form of yyyy-mm-dd... if any changes happen while inserting date format want to show error meg...any one can solve this..??
what is the diffrence between software and hardware language?
Number of null pointers in any binary tree
can anyone please tell me the procedure for the NIC personal interview as i have been selected for the post of scientist/technical assistant B
For a binary tree with n nodes, How many nodes are there which has got both a parent and a child?
Write a program to find factorial of a number using functions
Building Quotation engine program
what is delegate and delegation model give the real live example on delegate model
major characteristics of software system
C 
