Answer / guest

Suppose your sequences are stored in seq1.fna, seq2.fna.
Type the command line:
java -jar PH.jar -i seq1.fna -j seq2.fna
to compare the two sequences. If you are running the
PatternHunter demo version, replace "java -jar PH.jar"
with "ph".

Suppose you used the NCBI Blast server to look for a match to a fruit-fly gene. Suppose further that the best alignment contained this section of an alignment: Hit from database: XXXXXXXXXXXXXXNFSTSQ User sequence: SLEAEAAPASISPSNFSSSQ What do the Xs signify?

0 Answers  

---

How to compare a DNA sequence to itself by using it for both the 1st and 2nd sequence?

2 Answers  

---

What are the current challenges in the Pharmaceutical and biotechnology sectors?

0 Answers  

---

Why was the PatternHunter software program developed?

1 Answers  

---

Exactly how fast is PatternHunter when comparing two DNA sequences?

1 Answers  

---

How to identify highly mutated aminoacid from clustalw?

3 Answers  

---

what is the meaning of science?

7 Answers  

---

what is a Homologue?

2 Answers  

---

How much template do you need for sequencing?

1 Answers  

---

what is the length of the exon and intron

3 Answers  

---

Which of the following plots would be a straight line ? (a) Logarithm of decay rate against logarithm of time (b) Logarithm of decay rate against logarithm of number of decaying nuclei (c) Decay rate against time (d) Number of decaying nuclei against time

1 Answers   Wipro,

---

what is e value?

4 Answers  

---