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How to compare two DNA sequences?

Answer Posted / guest

Suppose your sequences are stored in seq1.fna, seq2.fna.
Type the command line:
java -jar PH.jar -i seq1.fna -j seq2.fna
to compare the two sequences. If you are running the
PatternHunter demo version, replace "java -jar PH.jar"
with "ph".

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