How do you find repeats within one DNA sequence?



How do you find repeats within one DNA sequence? ..

Answer / guest

Suppose your sequence is stored in a file seq.fna. Then
type
java -jar PHD.jar -i seq.fna
to find repeats within this sequence. If you are running
the PatternHunter demo version, replace "java -jar PH.jar"
with "ph".

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